List of Academic Publications (27)

The list contains mostly peer-reviewed articles published in journals with Impact Factor. Please click the article title to download it either as a preprint from arXiv, or from a web page of an open access publisher. If not available, feel free to drop me a line. I'll do my best to help you.


26. Folding of VemP into translation-arresting secondary structure is driven by the ribosome exit tunnel

MH Kolář, G Nagy, J Kunkel, SM Vaiana, LV Bock, H Grubmüller, under revision.


25. Atomistic simulations of the human proteasome inhibited by a covalent ligand

MH Kolář, LV Bock, H Grubmüller, to be published in High Performance Computing in Science & Engineering 2020

24. Assessment of Scalar Relativistic Effects on Halogen Bonding and Sigma-Hole Properties

MH Kolář, D Suchá, M Pitoňák, The International Journal of Quantum Chemistry, 2020, e26392.

23. Antitubercular Polyhalogenated Phenothiazines and Phenoselenazine with Reduced Binding to CNS Receptors

MG Nizi, J Desantis, Y Nakatani, S Massari, MA Mazzarella, G Shetye, S Sabatini, ML Barreca, G Manfroni, T Felicetti, R Rushton-Green, K Hards, G Latacz, G Satała, A Bojarski, V Ceccheti, MH Kolář, J Handzlik, G Cook, S Franzblau, O Tabarrini, European Journal of Medicinal Chemistry, 2020, 201, 112420.


Uups, there were no publications. Moving, third kid, you know...


22. Molecular Simulations of the Ribosome and Associated Translation Factors

LV Bock, MH Kolář, H Grubmüller, Current Opinion in Structural Biology, 2018, 49, 27-35.


21. Halogen Bonding in Nucleic Acid Complexes

MH Kolář, O Tabarrini, The Journal of Medicinal Chemistry, 2017, 60, 8681-8690.

20. Reaction Path Averaging: Characterizing Structural Response of the DNA Double Helix upon Electron Transfer

MH Kolář, T Kubař, The Journal of Physical Chemistry B, 2017, 121, 1520-1532.

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List of Popular Science Articles (16)

16. Who applies for Czech research grants and how successful is.

MH Kolář, R Hladík, Vesmír, 2020, 99, 134, in Czech.

15. Structure and Dynamics of a Ribosome-Regulatory Peptide

MH Kolář in Supercomputing in Science and Engineering 2017-18, K. Pešatová et al. Eds, 2019, ISBN 978-80-248-4289-9.

14. A thin line of authorship

MH Kolář, P Slavíček, Vesmír, 2019, 98, 50, in Czech.

13. Structure and Dynamics of Nascent Peptides in the Ribosome Exit Tunnel

H Grubmüller, MH Kolář, LV Bock, AC Vaiana, in High Performance Computing in Science and Engineering, P. Bastian et al. Eds, 2018.

12. Chemistry Olympiad or On the Life of Czech Young Chemists

MH Kolář, P Slavíček, Vesmír, online, in Czech.

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Other Texts (7)

7. From the Max Planck Institute to a university in Prague

MH Kolář, for Czexpats in Science, 2019, in Czech.

5. Molecular modelling in drug development

M Kolář, PhD thesis, 2013